Table S3 de genes and their relation to different aspects of hair follicle growth 




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Table S3 DE genes and their relation to different aspects of hair follicle growth (Stenn and Paus, 2001)

Factor Family

Gene description

probe set ID

Fold Change

Growth, patterning, and transcription factors

Fibroblast growth factor (FGF)

FGF18

Ovis aries fibroblast growth factor 18 (FGF18) mRNA

A_70_P067996

3.75

FGF7(KGF)

Ovis aries fibroblast growth factor 7

A_70_P029931

-2.26

FGF7(KGF)

Ovis aries fibroblast growth factor 7

A_70_P029932

-3.14

Insulin-like growth factor (IGF)

IGFBP3

Ovis aries insulin-like growth factor binding protein 3 (IGFBP3)

A_70_P028616

-4.22

Homeobox cluster genes

HOXA5

020605ONLN139002HT ONLN Ovis aries cDNA

A_70_P017042

-5.13

HOXA5

020605ONLN139002HT ONLN Ovis aries cDNA

A_70_P017041

-5.21

HOXA7

Ovis aries Hoxa-7

A_70_P017046

-4.38

HOXA7

Ovis aries Hoxa-7

A_70_P017047

-5.54

MMPs

MMP2

Ovis aries matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)

A_70_P061386

-2.24

MMP7

Ovis aries matrix metallopeptidase 7 (matrilysin, uterine)

A_70_P016331

-2.09

MMP7

Ovis aries matrix metallopeptidase 7 (matrilysin, uterine)

A_70_P016332

-3.07

Growth hormone

GHRHR

Ovis aries growth hormone releasing hormone receptor

A_70_P012591

2.35

Connexins

Connexin 43

CONNEXIN 43 protein

A_70_P016371

-19.46

Connexin 43

CONNEXIN 43 protein

A_70_P016372

-19.43

Cytokines

TNF

TNFRSF1A(Headon and Overbeek, 1999)

Ovis aries tumor necrosis factor receptor superfamily, member 1A

A_70_P036566

-3.62

Interleukins (IL)

IL6

Ovis aries interleukin 6

A_70_P039706

4.06

IL1A




A_70_P051177

-2.84

IL1A




A_70_P051176

-2.44

IL15

sh3P0047E11_F.ab1 adult sheep fracture callus 10d Ovis aries cDNA, mRNA sequence

A_70_P041522

-2.49

KeratinsKRTand Keratin-associated proteinsKAP

K38

Ovis aries keratin 38

A_70_P048717

4.28

LOC100188976


Sheep BIIIB3 high-sulfur keratin pseudogene mRNA

A_70_P016791


2.64




Rep: Keratin, type I cytoskeletal 15 - Ovis aries (Sheep)

A_70_P058276


-3.20

SCD

Ovis aries stearoyl-CoA desaturase (delta-9-desaturase)

A_70_P039361

-11.91

Enzymes

Cytochrome P450

CYP1A1

Ovis aries cytochrome P4501A1

A_70_P041841

-40.03

GLUD1

Ovis aries glutamate dehydrogenase 1 mRNA

A_70_P014771


-4.73

GLUD1

Ovis aries glutamate dehydrogenase 1 mRNA

A_70_P014772

-4.60

Integrins

ITGB1

Ovis aries integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)

A_70_P026041

-2.81

CD antigens

CD1

Ovis aries CD1 protein

A_70_P017086

3.71

Cyclin dependent

CDC2

Ovis aries cyclin-dependent kinase 1 (CDK1)

A_70_P047446

3.71

CDKN1B

020605OCS411027046HT OCS4 Ovis aries cDNA

A_70_P024517

-6.56

CDKN1B

020605OCS411027046HT OCS4 Ovis aries cDNA

A_70_P024516


-3.50

CCND2

020605ONLN034043HT ONLN Ovis aries cDNA

A_70_P005691


2.72

CCNA2

C0009265L09.P1KAM13F KN511 Ovis aries efferent gastric lymph from Teladorsagia infected sheep Ovis aries cDNA clone C0009265L09 5'

A_70_P034351

2.04

Sodium channel

SLC9A1

solute carrier family 9 (sodium/hydrogen exchanger), member 1

A_70_P031186

2.43

Potassium channel

KCNK3

potassium channel, subfamily K, member 3

A_70_P003551


2.42

Zinc ion signaling

ZFP36(TNF alpha inhibitor)

zinc finger protein 36, C3H type, homolog (mouse)

A_70_P030386

-4.43

TLRs

TLR1

Ovis aries toll-like receptor 1

A_70_P049616

2.12

Pregnancy-associated glycoprotein

PAG11

pregnancy-associated glycoprotein 11

A_70_P050941

2.15

Prostaglandin(Colombe et al., 2007; Johnstone and Albert, 2002)

PGFS

prostaglandin F synthase

A_70_P041786

-4.97

PTGER3

Ovis aries prostaglandin E receptor mRNA, partial cds

A_70_P041077


2.24

Aquaporin

AQP8

Aquaporin 8

A_70_P026742

-4.31

AQP1

Aquaporin 1

A_70_P051356

-3.72

AQP5

Aquaporin 5

A_70_P030151

2.30

EAAT

EAAT2

Ovis aries excitatory amino acid transporter 2

A_70_P026707

-6.49

EAAT2

Ovis aries excitatory amino acid transporter 2

A_70_P026706

-6.57





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