Table homology between selected G. mellonella mirna targets and related sequences in other arthropods mirna




Дата канвертавання18.04.2016
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Table S2. Homology between selected G. mellonella miRNA targets and related sequences in other arthropods




miRNA

Target in Galleria mellonella

Homology in other insects

Downregulated during entomopathogenic fungal infection

dps-miR-210b


RNA binding motif protein 8a

Helicoverpa armigera (Identity- 97%)

Downregulated during entomopathogenic fungal infection

dps-miR-210b

Transmembrane protein 201

Drosophila simulans (Identity- 41%)

Downregulated during entomopathogenic fungal infection

dps-miR-210b

1-acylglycerol-3-phosphate acyltransferase


Heliothis virescens (Identity- 86%), Nasonia vitripennis (Identity- 63%)

Downregulated during entomopathogenic fungal infection

dps-miR-210b

Quiescin sulfhydryl oxidase


Apis mellifera (Identity- 34%)

Downregulated during entomopathogenic fungal infection

dps-miR-210b

cg7759-isoform a


Danaus plexippus (Identity- 73%), Apis mellifera (Identity- 48%)

Upregulated in pre-pupae


bmo-miR-13b,ame-miR-13b,aae-miR-13

Moricin-like peptide c3


Danaus plexippus (Identity- 44%)


Upregulated in pre-pupae


tca-miR-92a-3p


similar to paramyosin (predicted)

Bombyx mori, (Identity- 96%), Tribolium castaneum (Identity- 64%)

Upregulated in pre-pupae


aae-miR-92a, aga-miR-92a


Thymus-specific serine protease


Danaus plexippus (Identity- 64%)

Upregulated in pre-pupae


api-miR-92a


AGAP004367-PA


Tribolium castaneum (Identity- 46%)

Upregulated in pre-pupae


dsi-miR-2581


v-type atpase 116-kda subunit family protein

Danaus plexippus (Identity 69%)


Downregulated in pre-pupae


bmo-miR-2760


general transcription factorpolypeptide 1


Danaus plexippus (Identity 79%), Megachile rotundata (Identity 88%)

Downregulated in pre-pupae


bmo-miR-2760


novel krab box and zinc-C2H2 type domain containing protein

Danaus plexippus (Identity- 79%)-

Upregulated in pre-pupae/ pupae


ame-miR-71


26S protease regulatory subunit s10b

Manduca sexta (identity 98%), Bombyx mori (identity 98%)

Upregulated in pupae


ame-miR-71


rio kinase 1


Culex quinquefasciatus (Identity 69%), Tribolium castaneum (Identity 69%)

Upregulated in pupae


ame-miR-71


cral trio domain-containing protein


Danaus plexippus (Identity 71%), Papilio xuthus (Identity 66%)

Upregulated in pupae

aae-miR-71

D-amino acid oxidase

Papilio xuthus (Identity-57%)

Upregulated in pupae


aae-miR-71


protein tyrosine phosphatase-like (proline instead of catalytic arginine)member b

Danaus plexippus (Identity- 71%)


Upregulated in pupae


api-miR-71


haloacid dehalogenase-like hydrolase domain containing 1a

Danaus plexippus (Identity- 79%)


Upregulated in pupae


api-miR-263a, tca-miR-263a


cg7781 cg7781-pa


Papilio xuthus (Identity 88%)


Upregulated in pupae


api-miR-263a, aae-miR-263a, tca-miR-263a-5p


cg1136 cg1136-pa


Bombyx mori (Identity- 69%)


Upregulated in pupae


api-miR-263a, tca-miR-263a-5p


solute carrier family 41 member 1


Danaus plexippus (Identity- 85%)


Upregulated in pupae


api-miR-263b, ame-miR-263b


cd27-bindingprotein isoform 1


Megachile rotundata (Identity- 34%)

Upregulated in pupae


api-miR-263b, ame-miR-263b


dead (asp-glu-ala-asp) box polypeptide 1

Bombus terrestris (Identity- 76%)


Upregulated in pupae

dps-miR-1006*


RNA binding motif protein 41


Loxodonta africana (Identity- 41%)

Downregulated in pupae

dme-miR-2b-1-5p

thap domain containing 9

Cydia pomonella (Identity- 65%)

Downregulated in pupae


tca-miR-1175-5p


lethalg0469 cg32597-isoform b


Papilio xuthus (Identity- 97%), Danaus plexippus (Identity- 97%)-

Downregulated in pupae


tca-miR-1175-5p


psmd1 protein


Danaus plexippus (Identity- 96%), Tribolium castaneum (Identity- 83%)

Downregulated in pupae


tca-miR-1175-5p


anon-66da protein

Danaus plexippus (Identity-100%), Tribolium castaneum (Identity- 82%)

Downregulated in pupae


der-miR-312,

dan-miR-312



cytochrome p450


Bombyx mandarina (Identity-58%)

Downregulated in pupae


der-miR-312,

dan-miR-312



coiled-coil domain containing 93


Tribolium castaneum (Identity- 41%)

Downregulated in pupae


der-miR-312,

dan-miR-312



thymus-specific serine protease

Culex quinquefasciatus (Identity- 38%)

Downregulated in pupae


der-miR-312,

dan-miR-312




frataxin


Aedes aegypti (Identity- 59%), Tribolium castaneum (Identity- 65%)

Downregulated in pupae


der-miR-312,

dan-miR-312



chromobox homolog 1


Tribolium castaneum (Identity- 47%), Nasonia vitripennis (Identity- 57%)

Downregulated in pupae


dan-miR-312


carboxylesterase


Spodoptera litura (Identity- 57%), Helicoverpa armigera (Identity- 57%)

Downregulated in pupae


dan-miR-312


xanthine dehydrogenase

Bombyx mori (Identity- 73%),

Danaus plexippus (Identity- 69%)

Downregulated in pupae

dme-miR-2b-1-5p

mitochondrial f0 atp synthase d

Papilio polytes (Identity- 78%)

Downregulated in pupae


dme-miR-4976-3p


organic cation transporter


Danaus plexippus (Identity- 58%), Aedes aegypti (Identity- 34%)

Downregulated in pupae


api-miR-929


ubiquitin-conjugating enzyme e2e 2 (ubc4 5yeast)

Apis mellifera (Identity- 97%), Aedes aegypti (Identity- 96%)

Downregulated in pupae


api-miR-929


zbed1 protein


Acyrthosiphon pisum (Identity- 48%)

Downregulated in pupae

aae-miR-2944b*

pupal cuticle protein

Bombyx mori (Identity- 76%)

Downregulated in pupae


aae-miR-2944b*


acetyl-coenzyme a acyltransferase 2 (mitochondrial 3-oxoacyl-coenzyme a thiolase)

Danaus plexippus (Identity- 50%)

Downregulated in pupae


aae-miR-2944b*


potassium-dependent sodium-calcium exchanger

Aedes aegypti (Identity- 42%)

Downregulated in pupae

rmi-miR-5324


bhlhzip transcription factor max bigmax


Aedes aegypti (Identity- 70%), Acyrthosiphon pisum (Identity- 72%)

Downregulated in pupae

rmi-miR-5324

sugar transporter


Bombyx mori (Identity- 68%), Danaus plexippus (Identity- 69%)

Downregulated in pupae

rmi-miR-5324

thioredoxin-like 4a


Nasonia vitripennis (Identity- 97%)

Downregulated in pupae

rmi-miR-5331


cdc28 protein kinase regulatory subunit 1b


Tribolium castaneum (Identity- 79%), Scylla paramamosain (Identity- 76%)





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