Supplementary Table 2




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100 (G)




A06

Springbok

biltong

Antidorcas marsupialis

JX567297

Bos taurus

100%

94

100

JX567144

Bos taurus

100%

99

100




A07

Kudu

biltong

Tragelaphus strepsiceros

JX567298

Bos taurus

100%

94

100

JX567145

Bos taurus

97%

99

100




A08

Ostrich

biltong

Struthio camelus

JX567299

Bos taurus

100%

94

100

JX567146

Bos taurus

100%

99

100




A09

Ostrich

biltong

Struthio camelus

JX567300

Struthio camelus

99%

100

100

JX567147

Struthio camelus

99%

100

100




A10

Kudu

biltong

Tragelaphus strepsiceros

JX567301

Bos taurus

99%

94

100

JX567148

Bos taurus

100%

99

100




A11

Kudu

biltong

Tragelaphus strepsiceros

JX567302

Tragelaphus oryx

99%

91

100

JX567149

Tragelaphus oryx

99%

98 (S)

100 (S)




A12

Ostrich

biltong

Struthio camelus

JX567303

Connochaetes gnou

99%

72

100

JX567150

Connochaetes gnou

99%

55

100 (G)




A13

Springbok

biltong

Antidorcas marsupialis

JX567304

Tragelaphus oryx

98%

91

100

JX567151

Tragelaphus oryx

99%

98 (S)

100




A14

Beef

biltong

Bos taurus

JX567305

Bos taurus

100%

94

100

JX567152

Bos taurus

100%

99

100




A15

Gemsbok

biltong

Oryx gazella

JX567306

Aepyceros melampus

99%

99

100

JX567153

Aepyceros melampus

99%

100

100




A16

impala

biltong

Aepyceros melampus

JX567307

Bos taurus

100%

94

100

JX567154

Bos taurus

100%

99

100




145

blesbok

fresh

Damaliscus pygargus

phillipsi

JX567308

Damaliscus pygargus

100%

89

100

JX567155

Damaliscus pygargus

100%

99

100




146

blesbok

fresh

Damaliscus pygargus

phillipsi

JX567309

Tragelaphus scriptus (SA)

99%

98

100

JX567156

Tragelaphus scriptus

99%

93

100 **




















































boots (*) the correct tree topology is not recovered





































ML (N): the highest bootstrap support is obtained at subspecies level, from Namibia










ML (S) : bootstrap for southern cluster
















ML boots (SA): indicated for the South African cluster of Connochaetes taurinus, higher bootstrap is obtained at the genus level

ML (Mr): assignment to a cluster containing M. robustus










ML boots (SE): indicated for Kobus ellipsiprymnus cluster, South-East Africa










ML (M): bootstrap for cluster with all Macropus













ML boots (**): bootstrap support is provided for the smallest inclusive group as monophyly is not recovered for the species




BLOG (G): 100% assignment to genus








































BLOG(S): 100% assignment to southern cluster
















 

indicates the better performing method

































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