Supplemental Table 1: Species used in this study, with hatching enzyme gene names, accession numbers and references.
Classification*1
|
Species
|
Gene name: Accession No.
|
Reference
|
Osteoglossomorpha
|
|
|
|
Osteoglossiformes
|
Osteoglossum bicirrhosum
Scleropages formosus
|
AwHE: AB276000
BtHE: AB480003
|
Kawaguchi et al., 2010
Kawaguchi et al., 2010
|
Elopomorpha
|
|
|
|
Elopiformes
|
Megalops cyprinoides
|
TpHE: AB480004
|
Kawaguchi et al., 2010
|
Albuliformes
|
Aldrovandia affinis
|
AaHE1/2: AB480005/6
|
Kawaguchi et al., 2010
|
Anguilliformes
|
Anguilla japonica
|
EHE4/7: AB071423/5
|
Hiroi et al., 2004
|
Saccopharyngiformes
|
Eurypharynx pelecanoides
|
PeHE1/2: AB480007/8
|
Kawaguchi et al., 2010
|
Otocephala
|
|
|
|
Clupeiformes
|
Clupea pallasii
Engraulis japonicus
|
HgHE1-3: AB433584-6
AcHE1-5: AB433587-91
|
Kawaguchi et al., 2009
Kawaguchi et al., 2009
|
Alepocephaliformes
|
Alepocephalus longiceps
Maulisia argipalla
Normichthys operosus
Platytroctes apus
Sagamichthys abei
|
AlHE1/2: AB549226/7
MaHE1/2: AB549228/9
NoHE1/2: AB549230/1
PaHE1/2: AB549232/3
SaHE1/2: AB549234/5
|
This study*2
This study*3
This study*3
This study*3
This study*3
|
Gonorynchiformes
|
Chanos chanos
|
MfHE1-3: AB480009-11
|
Kawaguchi et al., 2010
|
Cypriniformes
|
Danio rerio
Misgurnus anguillicaudatus
|
ZHE1/2: AB175621/0
LoHE1/2: AB480012/3
|
Inohaya et al., 1997
Kawaguchi et al., 2010
|
Characiformes
|
Paracheirodon innesi
|
NeHE1/2: AB480014/5
|
Kawaguchi et al., 2010
|
Siluriformes
|
Silurus asotus
|
CfHE1-3: AB480016-8
|
Kawaguchi et al., 2010
|
Gymnotiformes
|
Electrophorus electricus
|
EeHE1/2: AB480019/20
|
Kawaguchi et al., 2010
|
Euteleostei
|
|
|
|
Salmoniformes
|
Oncorhynchus masou
Oncorhynchus mykiss
|
MsHCE1/2: AB175619/8
MsLCE: AB480021
RbHCE1/2: AB480022/3
RbLCE: AB480024
|
Inohaya et al., 1997
Kawaguchi et al., 2010
Kawaguchi et al., 2010
|
Esociformes
|
Esox americanus
|
PkHCE1/2: AB480025/6
PkLCE: AB480027
|
Kawaguchi et al., 2010
|
Osmeriformes
|
Plecoglossus altivelis
Spirinchus lanceolatus
Hypomesus nipponensis
|
AyHCE: AB256940
AyLCE: AB256942
AyHE: AB256941
SlHCE: AB549216
SlLCE: AB549217
SlHE: AB549218
HnHCE: AB549219
HnLCE: AB549220
HnHE: AB549221
|
Kawaguchi et al., 2006
This study*4
This study*4
|
Argentiniformes
|
Glossanodon semifasciatus
Sagamichthys abei
|
GsHCE1/2: AB549222/3
GsLCE: AB549224
GsHE: AB549225
|
This study*5
|
Tetraodontiformes
|
Takifugu rubripes
Tetraodon nigroviridis
|
FgHCE: AB246041
FgLCE: AB246042
TnHCE: AB246043
TnLCE: AB246044
|
Kawaguchi et al., 2007
Kawaguchi et al., 2007
|
Beloniformes
|
Oryzias latipes
|
MHCE: M96170
MLCE: M96169
|
Yasumasu et al., 1992a
|
*1 *Classification follows Nelson (2006) with the exception of Otocephala comprising of Clupeiformes, Gonorynchiformes, Cypriniformes, Characiformes, Siluriformes, Gymnotiformes and Alepocephaliformes (Lavoue et al, 2008).
*2 Locality information: Aguni Basin, Okinawa, Japan. 16 S and D-loop regions were amplified and their sequences were checked with those of A. logiceps.
*3 Genomic DNA was derived from Lavoue et al 2008
*4 Samples were obtained from Salmon and Freshwater Fisheries Institute
*5 Genomic DNA was derived from Ishiguro et al 2003 |