Sequences used in phylogenetic analyses




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Table S1. Sequences used in phylogenetic analyses (those generated as part of this study are shown in bold).

Locus

Organism

GB/EMBL Acc.

GenInfo Id.

Nucleotide Sites*

vnfD

Anabaena azotica strain FACHB-118

AY422692.1

37694441

All




Anabaena sp. CH1

DQ294215.1

83034994

All




Anabaena variabilis

L20472.1

304058

All




Azospirillum brasilense Sp245

HE577330.1

356881273

698710-700073




Azotobacter chroococcum

X51756.1

38755

All




Azotobacter paspali clone pTL4

AF058781.1

3065910

All




Azotobacter salinestris clone pTL5

AF058782.1

3065914

All




Azotobacter vinelandii

M32371.1

142401

All




Clostridium kluyveri DSM 555

CP000673.1

152206095

1846666-1848054




Ethanoligenens harbinense YUAN-3

CP002400.1

315468987

2483573-2484964




Methanosarcina acetivorans str. C2A

AE010299.1

19918815

1447960-1449402




Methanosarcina barkeri

AF254784.1

8099625

All




Methanosarcina barkeri str. Fusaro

CP000099.1

72394721

2887882-2889279




Nitrogen-fixing bacterium BR2

EF694562.1

152032161

All




Nitrogen-fixing bacterium BR3

EF694563.1

152032163

All




Nitrogen-fixing bacterium BR5

EF694564.1

152032165

All




Nitrogen-fixing bacterium BR6

EF694565.1

152032167

All




Nitrogen-fixing bacterium BR8

EF694567.1

152032171

All




Nitrogen-fixing bacterium DP6

EF694569.1

152032175

All




Nitrogen-fixing bacterium DP7

EF694570.1

152032177

All




Nitrogen-fixing bacterium DU1

AF152909.1

5107307

All




Nitrogen-fixing bacterium MU1

EF694573.1

152032183

All




Nitrogen-fixing bacterium MU11

EF694578.1

152032193

All




Nitrogen-fixing bacterium MU12

EF694579.1

152032195

All




Nitrogen-fixing bacterium MU13

EF694580.1

152032197

All




Nitrogen-fixing bacterium MU4

EF694575.1

152032187

All




Nitrogen-fixing bacterium MU6

EF694576.1

152032189

All




Nitrogen-fixing bacterium MU7

EF694577.1

152032191

All




Nitrogen-fixing bacterium NC2

EF694581.1

152032199

All




Nitrogen-fixing bacterium SM1

AF152911.1

5107315

All




Nitrogen-fixing bacterium SM2

AF152912.1

5107319

All




Nitrogen-fixing bacterium TP1

AF152908.1

5107303

All




Nitrogen-fixing bacterium WA1

AF152910.1

5107311

All




Nitrogen-fixing bacterium WC1

AF152914.1

5107327

All




Nostoc sp. from Peltigera dolichorhiza

KF662362

-

All




Nostoc sp. from Peltigera malacea

KF662359

-

All




Nostoc sp. from Peltigera membranacea

KF662360

-

All




Nostoc sp. from Peltigera neopolydactyla

KF662361

-

All




Rhodomicrobium vannielii ATCC 17100

CP002292.1

311217923

588542-589960




Rhodopseudomonas palustris CGA009

BX572597.1

39648199

128427-129789




Uncultured bacterium clone BSC-vDG

AY422707.1

37694450

All

anfD

Chloroherpeton thalassium ATCC 35110

CP001100.1

193087197

2167725-2169269




Clostridium pasteurianum

L09762.1

385204

All




Rhodobacter capsulatus SB 1003

CP001312.1

294474377

626957-628540

vnfN

Anabaena variabilis

U51863.1

1263077

All




Clostridium kluyveri DSM 555

CP000673.1

152206095

1841946-1843286




Ethanoligenens harbinense YUAN-3

CP002400.1

315468987

2489271-2490617




Methanosarcina acetivorans str. C2A

AE010299.1

19918815

1452846-1454219




Methanosarcina barkeri str. Fusaro

CP000099.1

72394721

2882494-2883834




Nostoc sp. from Peltigera dolichorhiza

KF662369

-

All




Nostoc sp. from Peltigera malacea

KF662365

-

All




Nostoc sp. from Peltigera membranacea

KF662370

-

All




Nostoc sp. from Peltigera neopolydactyla

KF662368

-

All




Nostoc sp. from Peltigera praetextata

KF662367

-

All

* For sequences found only as part of whole genomes, plasmids, or contigs, the particular nucleotide sites downloaded from GenBank are specified.


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