Fossøy et al. Genetic differentiation among sympatric cuckoo host races – males matter
Table S1. Characteristics of microsatellite loci used for analysing autosomal genetic variation. One offspring per cluster was randomly selected to avoid pseudoreplication. The number of alleles, observed (HO) and expected (HE) heterozygosity and p-values (P) for Hardy-Weinberg deviations are reported for each locus.
Locus
|
No. Alleles
|
HO
|
HE
|
P
|
|
Reference
|
Ccμ1
|
4
|
0.27
|
0.30
|
0.33
|
|
Gibbs et al. (1996)
|
Ccμ2
|
10
|
0.47
|
0.88
|
<0.001
|
*
|
Gibbs et al. (1998)
|
Ccμ9
|
3
|
0.53
|
0.50
|
1.00
|
|
Gibbs et al. (1996)
|
Ccμ13
|
6
|
0.60
|
0.70
|
0.55
|
|
Gibbs et al. (1996)
|
Ccμ60
|
20
|
0.93
|
0.93
|
0.63
|
|
Gibbs et al. (1998)
|
Ccμ88
|
9
|
0.80
|
0.75
|
0.83
|
|
Gibbs et al. (1998)
|
Ccμ100
|
5
|
0.47
|
0.69
|
0.14
|
|
Gibbs et al. (1998)
|
Ccμ108
|
7
|
0.60
|
0.55
|
0.85
|
|
Gibbs et al. (1998)
|
Ccμ119
|
24
|
0.87
|
0.94
|
0.24
|
|
Gibbs et al. (1998)
|
Ccμ137
|
20
|
0.87
|
0.93
|
0.62
|
|
Gibbs et al. (1998)
|
Cb8
|
23
|
1.00
|
0.93
|
0.93
|
|
Adcock et al. (2007)
|
Clu2
|
7
|
0.79
|
0.75
|
0.98
|
|
Adcock et al. (2007)
|
Clu3
|
4
|
0.33
|
0.41
|
0.23
|
|
Adcock et al. (2007)
|
Clu5
|
12
|
0.79
|
0.88
|
0.25
|
|
Adcock et al. (2007)
|
* significant after Bonferroni correction
References
Adcock GJ, Langmore NE, Kilner RM (2007) Polymorphic microsatellite loci for studies of bronze-cuckoo species (Genus Chalcites : Aves). Mol. Ecol. Notes 7, 678-680.
Gibbs HL, Brooke MD, Davies NB (1996) Analysis of genetic differentiation of host races of the common cuckoo Cuculus canorus using mitochondrial and microsatellite DNA variation. Proc. R. Soc. B 263, 89-96.
Gibbs HL, De Sousa L, Marchetti K, Nakamura H (1998) Isolation and characterization of microsatellite DNA loci for an obligate brood parasitic bird, the common cuckoo (Cuculus canorus). Mol. Ecol. 7, 1437-1439.
|