GenBank Number




Дата канвертавання19.04.2016
Памер27.17 Kb.

Species

Clade

GenBank Number

Reference

Phascolosoma esculenta

Sipuncula

EF583817

This study

Clymenella torquata

Annelida, Polychaeta, Scolecida, Maldanidae

NC_006321

[1]

Orbinia latreillii

Annelida, Polychaeta, Scolecida, Orbiniidae

NC_007933

[2]

Platynereis dumerilii

Annelida, Polychaeta, Palpata

NC_000931

[3]

Lumbricus terrestris

Annelida, Clitellata, Oligochaeta

NC_001673

[4]

Urechis caupo

Echiura

NC_006379

[5]

Loxocorone allax

Entoprocta

NC_010431

[6]

Loxosomella aloxiata

Entoprocta

NC_010432

[6]

Bugula neritina

Bryozoa

NC_010197



Flustrellidra hispida

Bryozoa

NC_008192

[7]

Brachionus plicatilis

Rotifera

NC_010472

NC_010484



[8]

Riftia pachyptila

Pogonophora

AY741662

[1]

Myzostoma seymourcollegiorum

Myzostomida

EF506562

[9]

Terebratulina retusa

Brachiopoda, Articulata

NC_000941

[10]

Laqueus rubellus

Brachiopoda, Articulata

NC_002322

[11]

Terebratalia transversa

Brachiopoda, Articulata

NC_003086

[12]

Lampsilis ornata

Mollusca, Bivalvia

NC_005335

[13]

Katharina tunicata

Mollusca, Polyplacophora

NC_001636

[14]

Haliotis rubra

Mollusca, Gastropoda

NC_005940

[15]

Nautilus macromphalus

Mollusca, Cephalopoda

NC_007980

[16]

Acanthocardia tuberculata

Mollusca, Bivalvia

NC_008452

[17]

Mytilus edulis

Mollusca, Bivalvia

NC_006161

[18]

Drosophila melanogaster

Arthropoda, Hexapoda

NC_001709

[19]

Penaeus monodon

Arthropoda, Crustacea

NC_002184

[20]

Ixodes hexagonus

Arthropoda, Chelicerata

NC_002010

[21]

Lithobius forficatus

Arthropoda, Myriapoda

NC_002629

[22]

Outgroup










Geodia neptuni

Porifera

NC_006990

[23]

Metridium senile

Cnidaria

NC_000933

[24]

Trichoplax adhaerens

Placozoa

NC_008151

[25]

Note: † unpublished

1. Jennings RM, Halanych KM: Mitochondrial genomes of Clymenella torquata (Maldanidae) and Riftia pachyptila (Siboglinidae): evidence for conserved gene order in annelida. Mol Biol Evol 2005, 22(2):210-222.

2. Bleidorn C, Podsiadlowski L, Bartolomaeus T: The complete mitochondrial genome of the orbiniid polychaete Orbinia latreillii (Annelida, Orbiniidae)--A novel gene order for Annelida and implications for annelid phylogeny. Gene 2006, 370:96-103.

3. Boore JL, Brown WM: Mitochondrial genomes of Galathealinum, Helobdella, and Platynereis: sequence and gene arrangement comparisons indicate that Pogonophora is not a phylum and Annelida and Arthropoda are not sister taxa. Mol Biol Evol 2000, 17(1):87-106.

4. Boore JL, Brown WM: Complete sequence of the mitochondrial DNA of the annelid worm Lumbricus terrestris. Genetics 1995, 141(1):305-319.

5. Boore JL: Complete mitochondrial genome sequence of Urechis caupo, a representative of the phylum Echiura. BMC Genomics 2004, 5(1):67.

6. Yokobori S, Iseto T, Asakawa S, Sasaki T, Shimizu N, Yamagishi A, Oshima T, Hirose E: Complete nucleotide sequences of mitochondrial genomes of two solitary entoprocts, Loxocorone allax and Loxosomella aloxiata: implications for lophotrochozoan phylogeny. Mol Phylogenet Evol 2008, 47(2):612-628.

7. Waeschenbach A, Telford MJ, Porter JS, Littlewood DT: The complete mitochondrial genome of Flustrellidra hispida and the phylogenetic position of Bryozoa among the Metazoa. Mol Phylogenet Evol 2006, 40(1):195-207.

8. Suga K, Mark Welch DB, Tanaka Y, Sakakura Y, Hagiwara A: Two circular chromosomes of unequal copy number make up the mitochondrial genome of the rotifer Brachionus plicatilis. Mol Biol Evol 2008, 25(6):1129-1137.

9. Bleidorn C, Eeckhaut I, Podsiadlowski L, Schult N, McHugh D, Halanych KM, Milinkovitch MC, Tiedemann R: Mitochondrial genome and nuclear sequence data support myzostomida as part of the annelid radiation. Mol Biol Evol 2007, 24(8):1690-1701.

10. Stechmann A, Schlegel M: Analysis of the complete mitochondrial DNA sequence of the brachiopod Terebratulina retusa places Brachiopoda within the protostomes. Proc R Soc Lond B Biol Sci 1999, 266(1433):2043-2043.

11. Noguchi Y, Endo K, Tajima F, Ueshima R: The mitochondrial genome of the brachiopod Laqueus rubellus. Genetics 2000, 155(1):245-259.

12. Helfenbein KG, Brown WM, Boore JL: The complete mitochondrial genome of the articulate brachiopod Terebratalia transversa. Mol Biol Evol 2001, 18(9):1734-1744.

13. Serb JM, Lydeard C: Complete mtDNA sequence of the North American freshwater mussel, Lampsilis ornata (Unionidae): an examination of the evolution and phylogenetic utility of mitochondrial genome organization in Bivalvia (Mollusca). Mol Biol Evol 2003, 20(11):1854-1866.

14. Boore JL, Brown WM: Complete DNA sequence of the mitochondrial genome of the black chiton, Katharina tunicata. Genetics 1994, 138(2):423-443.

15. Maynard BT, Kerr LJ, McKiernan JM, Jansen ES, Hanna PJ: Mitochondrial DNA sequence and gene organization in the [corrected] Australian blacklip [corrected] abalone Haliotis rubra (leach). Mar Biotechnol (NY) 2005, 7(6):645-658.

16. Boore JL: The complete sequence of the mitochondrial genome of Nautilus macromphalus (Mollusca: Cephalopoda). BMC Genomics 2006, 7:182.

17. Dreyer H, Steiner G: The complete sequences and gene organisation of the mitochondrial genomes of the heterodont bivalves Acanthocardia tuberculata and Hiatella arctica - and the first record for a putative Atpase subunit 8 gene in marine bivalves. Front Zool 2006, 3:13-26.

18. Boore JL, Medina M, Rosenberg LA: Complete sequences of the highly rearranged molluscan mitochondrial genomes of the Scaphopod Graptacme eborea and the Bivalve Mytilus edulis. Mol Biol Evol 2004, 21(8):1492-1503.

19. Lewis DL, Farr CL, Farquhar AL, Kaguni LS: Sequence, organization, and evolution of the A+T region of Drosophila melanogaster mitochondrial DNA. Mol Biol Evol 1994, 11(3):523-538.

20. Wilson K, Cahill V, Ballment E, Benzie J: The complete sequence of the mitochondrial genome of the crustacean Penaeus monodon: are malacostracan crustaceans more closely related to insects than to branchiopods? Mol Biol Evol 2000, 17(6):863-874.

21. Black WCt, Roehrdanz RL: Mitochondrial gene order is not conserved in arthropods: prostriate and metastriate tick mitochondrial genomes. Mol Biol Evol 1998, 15(12):1772-1785.

22. Lavrov DV, Brown WM, Boore JL: A novel type of RNA editing occurs in the mitochondrial tRNAs of the centipede Lithobius forficatus. Proc Natl Acad Sci U S A 2000, 97(25):13738-13742.

23. Lavrov DV, Forget L, Kelly M, Lang BF: Mitochondrial genomes of two demosponges provide insights into an early stage of animal evolution. Mol Biol Evol 2005, 22(5):1231-1239.

24. Beagley CT, Okimoto R, Wolstenholme DR: The mitochondrial genome of the sea anemone Metridium senile (Cnidaria): introns, a paucity of tRNA genes, and a near-standard genetic code. Genetics 1998, 148(3):1091-1108.

25. Dellaporta SL, Xu A, Sagasser S, Jakob W, Moreno MA, Buss LW, Schierwater B: Mitochondrial genome of Trichoplax adhaerens supports placozoa as the basal lower metazoan phylum. Proc Natl Acad Sci USA 2006, 103(23):8751-8756.





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