Additional file 3



Дата24.04.2016
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Additional file 3. Chronogram and table of inferred ages from the Bayesian random local clock molecular dating analysis of the seed-plant data set.


Figure. Bayesian random local clock dating of seed-plant phylogeny based on 13 plastid genes. Labelled nodes are cross-referenced with main text Table 1 and the Table below. The time scale is in Ma (geological time scale according the International Commission on Stratigraphy, 2012). Blue bars on nodes represent 95% HPD; red stars are minimum ages of calibration fossils (Table 1) and red bars are their assigned 95% prior age distributions. Numbers adjacent to branches are posterior probability support values (expressed as percentages). L, lower; Neog, Neogene; U, upper; T., Trithuria.


Table. Estimated ages of splits in seed-plant phylogeny based on a Bayesian random local clocks analysis of 13 plastid regions (see Figure above). Mean and 95% HPD are indicated for individual nodes labelled in the Figure above. All clades or taxa concern crown clades and taxa. MRCA, most recent common ancestor.


Node

Clade or taxon

Mean age (Ma)

95% HPD of age (Ma)

A

Seed plants

325.87

315.21-349.37

B

MRCA Ginkgo + Pinus

301.56

274.79-330.71

C

MRCA angiosperms + Cycas

302.16

294.18-314.42

D

Angiosperms

158.67

151.05-167.72

E

MRCA Amborella + Nymphaeales

152.44

146.25-158.91

F

Nymphaeales

126.69

120.58-133.21

G

MRCA Cabomba + Nymphaeaceae

102.11

98.84-107.07

H

Nymphaeaceae

95.52

92.94-99.61

I

Hydatellaceae

19.07

15.72-23.36

J

MRCA T. filamentosa + T. submersa

16.21

13.41-19.28

K

MRCA Austrobaileyales + Mesangiosperms

140.22

135.32-145.58

L

Austrobaileyales

118.27

109.87-130.83

M

MRCA Schisandra + Trimenia

102.12

98.77-107.93

N

Mesangiosperms

125.11

124.06-126.82

O

Monocots

104.24

97.98-110.47

P

Eudicots

96.28

92.98-100.39

Каталог: content -> supplementary
supplementary -> X��t��y�i��#�J9�n�����ϗ�q߂�o?#��K9���y��
supplementary -> Additional file 4 The alternative topologies used in statistical tests. The numbers in parentheses indicate the source of alternative topologies
supplementary -> J. Fish. Aquat. Sc. 2004, 4: 111-113. Arkhipkin ai, Laptikhovsky V: Discovery of the fourth species of the enigmatic chiroteuthid squid
supplementary -> Additional file 1
supplementary -> Supplementary Material for
supplementary -> Additional file 2: Major disease categories and associated medicinal plants used by Aboriginal people of boreal Canada
supplementary -> Supplementary Table
supplementary -> Appendix 2: Taxonomic structure of Rhinopomatidae: morphospecies vs molecular phylogenetics
supplementary -> Additional file 1 List of species used, with database accession numbers
supplementary -> Family Subfamily


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