8. citace literární zdroje




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8. CITACE
8.1. Literární zdroje


  1. Ainsworth, C. 2000. Boys and girls come out to play: The molecular biology of dioecious plants. Annals of Botany 86:211-221.

  2. Bowers, J.E., B.A. Chapman, J. Rong, and A.H. Paterson. 2003. Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events. Nature 422:433-8.

  3. Bůžek, J., H. Koutníková, A. Houben, K. Říha, B. Janoušek, J. Široký, S. Grant, and B. Vyskot. 1997. Isolation and characterization of X chromosome-derived DNA sequences from a dioecious plant Melandrium album. Chromosome Res 5:57-65.

  4. Ciupercescu, D. D., J. Veuskens, A. Mouras, D. Ye, and M. Briquet. 1990. Karyotyping Melandrium album, a dioecious plant with heteromorphic sex

chromosomes. Genome 33:556-562.

  1. Delichere, C., J. Veuskens, M. Hernould, N. Barbacar, A. Mouras, I. Negrutiu, and F. Moneger. 1999. SlY1, the first active gene cloned from a plant Y chromosome, encodes a WD-repeat protein. Embo J 18:4169-79.

  2. Desfeux, C., S. Maurice, J.P. Henry, B. Lejeune, and P.H. Gouyon. 1996. Evolution of reproductive system in the genus Silene. Proc R Lond B 263:409-414.

  3. Donnison, I., S., J. Široký, B. Vyskot, H. Saedler, and S.R. Grant. 1996. Isolation of Y chromosome-specific sequences from Silene latifolia and mapping of male sex-determining genes using representational difference analysis. Genetics 144:1893-901.

  4. Filatov D., A., V. Laporte, C. Vitte and D. Charlesworth. 2001. DNA diversity in sex-linked and autosomal genes of the plant species Silene latifolia and Silene dioica. Mol Biol Evol 18(8):1442-1454.

  5. Goureau, A., A. Garrigues, G. Tosser-Klopp, Y. Lahbib-Mansais, P. Chardon and M. Yerle. 2001. Conserved synteny and gene order difference between human chromosome 12 and pig chromosome 5. Cytogenet Cell Genet 94(1-2):49-54.

  6. Guttman, D.S. and D. Charlesworth. 1998. An X-linked gene with a degenerate Y-linked homologue in a dioecious plant. Nature 393:263-6.

  7. Hladilová, R., J. Široký, and B. Vyskot. 1998. A cytospin technique for spreading plant metaphases suitable for immunofluorescence studies. Biotech Histochem 73:150-6.

  8. Hobza R., M. Lengerová, H. Černohorská, J. Rubeš and B. Vyskot. 2004. Fast FISH with laser beam microdissected DOP-PCR probe distinguishes the sex chromosomes of Silene latifolia. Chromosome Res 12:245-250.

  9. Charlesworth, B. 1991. The evolution of sex chromosomes. Science 251:1030-1033.

  10. Charlesworth, D. 2002. Plant sex determination and sex chromosomes. Heredity 88:94-101.

  11. Chowdhary B., P., Raudsepp T., Fronicke L. and Scherthan H. 1998. Emerging patterns of comparative genome organization in some mammalian species as revealed by Zoo-FISH. Genome Res 8(6):577-89.

  12. Inoue, H., H. Nojima, and H. Okayama. 1990. High efficiency transformation of Escherichia coli with plasmids. Gene 96:23-28.

  13. Jackson, S., A., Z. Cheng, M.L. Wang, H.M. Goodman, and J. Jiang. 2000. Comparative fluorescence in situ hybridization mapping of a 431-kb Arabidopsis thaliana bacterial artificial chromosome contig reveals the role of chromosomal duplications in the expansion of the Brassica rapa genome. Genetics 156:833-8.

  14. Janoušek, B., Grant, R.S. and B. Vyskot. 1998. Non-transmissibility of the Y chromosome through the female line in androhermaphrodite plants of Melandrium album. Heredity 80:576-583.

  15. Kejnovský, E., J. Vrána, S. Matsunaga, P. Souček, J. Široký, J. Doležel, B. Vyskot, A. Araya, J. Veuskens, I. Negrutiu, and A. Mouras. 2001. Localization of male-specifically expressed MROS genes of Silene latifolia by PCR on flow-sorted sex chromosomes and autosomes. Genetics 158:1269-77.

  16. Lahn B., T. and D.C. Page 1999. Four evolutionary strata on the human X chromosome. Science 286:964-967.

  17. Lebel-Hardenack, S., E. Hauser, T.F. Law, J. Schmid, and S.R. Grant. 2002. Mapping of sex determination loci on the white campion (Silene latifolia) Y chromosome using amplified fragment length polymorphism. Genetics 160:717-25.

  18. Lengerová M. and Vyskot B. 2001. Sex chromatin and nucleolar analyses in Rumex acetosa L. Protoplasma 217:147-153.

  19. Lengerová M., Moore R.C. Grant S.R. and Vyskot B. 2003. The sex chromosomes of Silene latifolia revisited and revised. Genetics 165(2):935-938.

  20. Lengerová, M., Kejnovský, E., Hobza, R., Macas, J., Grant, S.R. and B. Vyskot. 2004. Multicolor FISH mapping of the dioecious model plant, Silene latifolia. Theoretical and Applied Genetics (in press).

  21. Liu Z., Moore P.H., Ma H., Ackerman C.M., Ragiba M., Yu Q., Pearl H.M., Kim M.S., Charlton J.W., Stiles J.I., Zee F.T., Paterson A.H. and Ming R. 2004. A primitive Y chromosome in papaya marks incipient sex chromosome evolution. Nature 427(6972):348-52.

  22. Macas, J., G. Gualberti, M. Nouzová, P. Samec, S. Lucretti, and J. Doležel. 1996. Construction of chromosome-specific DNA libraries covering the whole genome of field bean (Vicia faba L.). Chromosome Res 4:531-9.

  23. Matsunaga, S., S. Kawano, H. Takano, H. Uchida, Kuroiwa T. and A. Sakai. 1996.  Isolation and developmental expression of male reproductive organ-specific genes in a dioecious campion, Melandrium album (Silene latifolia). Plant Journal 10:679-689.

  24. Matsunaga, S., F. Yagisawa, M. Yamamoto, W. Uchida, S. Nakao, and S. Kawano. 2002. LTR retrotransposons in the dioecious plant Silene latifolia
    Genome 45(4):745-751.

  25. Matsunaga, S, Isono, E, Kejnovský, E, Vyskot, B, Doležel, J, Kawano, S. and Charlesworth, D. 2003. Duplicative transfer of a MADS box gene to a plant Y chromosome. Mol Biol Evol 20(7):1062-9.

  26. Moore, R.C., O. Kozyreva, S. Lebel-Hardenack, J. Široký, R. Hobza, B. Vyskot, and S.R. Grant. 2003. Genetic and functional analysis of DD44, a sex-linked gene from the dioecious plant Silene latifolia, provides clues to early events in sex chromosome evolution. Genetics 163:321-34.

  27. Negrutiu, I., B. Vyskot, N. Barbacar, S. Georgiev, and F. Moneger. 2001. Dioecious plants. A key to the early events of sex chromosome evolution. Plant Physiol 127:1418-24.

  28. Obara, M., S. Matsunaga, S. Nakao, and S. Kawano. 2002. A plant Y chromosome-STS marker encoding a degenerate retrotransposon. Genes Genet Syst 77:393-8.

  29. Renner, S., S. and R.E. Ricklefs. 1995. Dioecy and its correlates in the flowering plants. American Journal of Botany 82:596-606.

  30. Saxena, R., L.G. Brown, T. Hawkins, R.K. Alagappan, H. Skaletsky, M.P. Reeve, R. Reijo, S. Rozen, M.B. Dinulos and C.M. Disteche. 1996. The DAZ gene cluster on the human Y chromosome arose from an autosomal gene that was transposed, repeatedly amplified and pruned. Nat Genet 14:292-299.

  31. Sakamoto K., N. Ohmido, K. Fukui, H. Kamada and S. Satoh. 2000. Site-specific saccumulation of a LINE-like retrotransposon in a sex chromosome of the dioecious plant Cannabis sativa. Plant Mol Biol 44(6):723-32.

  32. Šourková, M. in S. Hejný and B. Slavík (eds). Květena České republiky sv. 2. 1990. 160-180.

  33. Telenius H., N.P. Carter, C.E. Bebb, M. Nordenskjodl, B.A.J. Ponder, and A. Tunnacliffe. 1992. Degenerate Oligonucleotide-Primed PCR: General amplification of target DNA by a single degenerate primer. Genomics 13:718-725.

  34. van Leeuwen, H., A. Monfort, H.B. Zhang, and P. Puigdomenech. 2003. Identification and characterisation of a melon genomic region containing a resistance gene cluster from a constructed BAC library. Microcolinearity between Cucumis melo and Arabidopsis thaliana. Plant Mol Biol 51:703-18.

  35. van Nigtevecht, G. 1966. Genetic studies in dioecious Melandrium: I. Sex-linked and sex-influenced inheritance in Melandrium album and Melandrium dioicum. Genetica 37:307-344.

  36. Veuskens, J., D. Ye, M. Oliviera, D.D. Ciupercescu, and P. Installe et al. 1992. Sex determination in the dioecious Melandrium album-androgenetic embryogenesis requires the presence of the X-chromosome. Genome 35:8-16.

  37. Vyskot, B., A. Araya, J. Veuskens, I. Negrutiu, and A. Mouras. 1993. DNA methylation of sex chromosomes in a dioecious plant, Melandrium album. Mol Gen Genet 239:219-24.

  38. Westergaard, M. 1946. Aberrant Y chromosomes and expression in Melandrium album. Hereditas 32(3-4):419-443.

  39. Westergaard, M. 1958. The mechanism of sex determination in dioecious flowering plants. Advances in Genetics 9:217-281.

  40. Yampolsky C. and H. Yampolsky. 1922. Distribution of the sex forms in the phanerogamic flora. Bibliography of Genetics 3:1-62.

  41. Zoller, J., F., Y. Yang, R.G. Herrmann, and U. Hohmann. 2001. Comparative genomic in situ hybridization (cGISH) analysis on plant chromosomes revealed by labelled Arabidopsis DNA. Chromosome Res 9:357-75.

8.2. Použité programy:

CLUSTAL W, verze 1.8


Higgins D., J. Thompson, T. Gibson, J.D. Thompson, D.G. Higgins and T.J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressivemultiple sequence alignment through sequence weighting,position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673-4680. http://www.ebi.ac.uk/clustalw/

FASTA

W. R. Pearson and D. J. Lipman. 1988. Improved Tools for Biological Sequence

Comparison. PNAS 85:2444- 2448.



http://www.ebi.ac.uk/fasta33/index.html

PRIMER3


Steve Rozen. 1996. Whitehead Institute for Biomedical research.

http://www-genome.wi.mit.edu/cgi-bin/primer/primer3_www.cgi

RHMAP - Statistical Package for Multipoint Radiation Hybrid Mapping, Version 2.01.

Michael Boehnke, E. Hauser, K. Lange, K. Lunetta, J. Uro, and J.VanderStoep.

1995. Department of Biostatistics, School of Public Health, University of

Michigan.

Program je volně dostupný na internetu:



http://cgil.uoguelph.ca/QTL/labs.htm
Poslední přístupy na uvedené internetové adresy: Duben 2004.
8.3. Vlastní postery a účasti na konferencích
Hobza R., M. Lengerová, P. Hrušáková, E. Kejnovský, and B. Vyskot. The DNA sturcture differences between X and Y chromosomes of Silene latifolia. 2003. Plant Reproduction: From Mendel to Molecular Biology - The IX International Conference on Plant Embryology, Brno. (Poster: viz. příloha)
Hrušáková P. a R. Hobza. Studie evoluce pohlavních chromozómů u Silene latifolia. 2004. Česko-slovenská studentská vědecká konference, Brno.





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