Probe types (est clone ida)




Дата канвертавання22.04.2016
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S1 Description of the probes used to screen the Liriodendron library.


Gene names

Probe types

(EST clone IDa)

Probe sizes

Species b with best BLASTX alignment (E-value)

Gigantea

cDNA

(ltu01-8ms2-a11)



1.3kb

Lemna paucicostata

(1e-118)


Frigida

cDNA

(ltu01-15ms2-f09)



1.7kb

Arabidopsis thaliana

(3e-28)


LFY

Genomic DNA amplicon

490bp

Apios americana

(7e-13)


CAD

cDNA

(ltu01-14ms2-e09)



600bp

Arabidopsis thaliana

(6e-73)


4CL

cDNA

(ltu01-17ms2-g12)



1.5kbp

Glycine max

(2e-50)


PAL

cDNA

(ltu01-17ms3-f01)



950bp

Glycine max

(8e-132)


a cDNA library and EST information are available at http://www.floralgenome.org/fgp/

b Species whose sequence in GenBank had the best BLASTX alignments to the yellow poplar cDNA or gene fragment used as probe


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